EnhancerDB
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  3. rs552739872[chr1:202079872]
Enhancers that have rs552739872[chr1:202079872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202068088 202086155 enh12535
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552739872[chr1:202079872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202079864 202079875 ETV2 JASPAR yes 34554934
chr1 202079865 202079875 ERF JASPAR yes 34554935
chr1 202079865 202079875 ERG JASPAR yes 34554936
chr1 202079865 202079875 ETS1 JASPAR yes 34554937
chr1 202079865 202079875 FLI1 JASPAR yes 34554938
chr1 202079866 202079874 FEV JASPAR yes 34554939
chr1 202079867 202079878 NFKB1 JASPAR yes 34554940
chr1 202079868 202079878 NFKB1 JASPAR yes 34554941
chr1 202079868 202079879 NFKB1 JASPAR yes 34554942
chr1 202079872 202079880 FEV JASPAR yes 34554943
Genes associated with rs552739872[chr1:202079872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More