EnhancerDB
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  3. rs552747204[chr1:155200172]
Enhancers that have rs552747204[chr1:155200172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs552747204[chr1:155200172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155200162 155200175 SMAD2 JASPAR yes 32337459
chr1 155200169 155200184 SCRT1 JASPAR yes 32337460
chr1 155200170 155200180 ID4 JASPAR yes 32337461
chr1 155200170 155200180 TCF3 JASPAR yes 32337462
chr1 155200170 155200180 TCF4 JASPAR yes 32337463
chr1 155200171 155200180 SNAI2 JASPAR yes 32337464
chr1 155200172 155200177 USF2 TRANSFAC yes 32337465
Genes associated with rs552747204[chr1:155200172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More