EnhancerDB
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  3. rs552768921[chr17:41543540]
Enhancers that have rs552768921[chr17:41543540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41539589 41549375 enh17170
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs552768921[chr17:41543540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41543307 41543923 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760881
chr17 41543386 41543786 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760882
chr17 41543403 41543739 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760883
chr17 41543435 41543685 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760884
chr17 41543476 41543812 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760885
chr17 41543492 41543607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760886
chr17 41543492 41543716 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760887
chr17 41543494 41543810 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760888
chr17 41543494 41543934 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760889
chr17 41543497 41543646 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760890
chr17 41543499 41543759 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760891
chr17 41543504 41543884 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760892
chr17 41543509 41543809 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760893
chr17 41543533 41543544 FOXH1 JASPAR yes 54350895
chr17 41543534 41543544 HOXA13 JASPAR yes 54350899
chr17 41543534 41543544 HOXB13 JASPAR yes 54350900
chr17 41543534 41543544 HOXD13 JASPAR yes 54350901
chr17 41543535 41543547 FOXI1 JASPAR yes 54350902
chr17 41543537 41543545 FOXG1 JASPAR yes 54350903
chr17 41543538 41543550 TAL1 JASPAR yes 54350904
Genes associated with rs552768921[chr17:41543540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More