EnhancerDB
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  3. rs552783094[chr5:171393347]
Enhancers that have rs552783094[chr5:171393347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs552783094[chr5:171393347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171393333 171393351 IRF2 JASPAR yes 67751761
chr5 171393340 171393355 FOXP1 JASPAR yes 67751762
chr5 171393340 171393361 IRF1 JASPAR yes 67751763
chr5 171393341 171393356 FOXP1 JASPAR yes 67751764
chr5 171393341 171393362 IRF1 JASPAR yes 67751765
chr5 171393342 171393347 ETS2 TRANSFAC yes 67751766
Genes associated with rs552783094[chr5:171393347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More