EnhancerDB
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  3. rs552789038[chr6:107170215]
Enhancers that have rs552789038[chr6:107170215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552789038[chr6:107170215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107170201 107170215 POU1F1 JASPAR yes 104061982
chr6 107170202 107170215 DUXA JASPAR yes 104061983
chr6 107170205 107170215 POU6F2 JASPAR yes 104061987
chr6 107170206 107170216 EMX1 JASPAR yes 104061988
chr6 107170206 107170216 EMX2 JASPAR yes 104061989
chr6 107170206 107170216 ESX1 JASPAR yes 104061990
chr6 107170206 107170216 EVX1 JASPAR yes 104061991
chr6 107170206 107170216 EVX2 JASPAR yes 104061992
chr6 107170206 107170216 GBX1 JASPAR yes 104061993
chr6 107170206 107170216 HESX1 JASPAR yes 104061994
chr6 107170206 107170216 HOXA2 JASPAR yes 104061995
chr6 107170206 107170216 HOXB2 JASPAR yes 104061996
chr6 107170206 107170216 HOXB3 JASPAR yes 104061997
chr6 107170206 107170216 LBX2 JASPAR yes 104061998
chr6 107170206 107170216 LHX2 JASPAR yes 104061999
chr6 107170206 107170216 LHX6 JASPAR yes 104062000
chr6 107170206 107170216 MEOX1 JASPAR yes 104062001
chr6 107170206 107170216 MEOX2 JASPAR yes 104062002
chr6 107170206 107170216 NOTO JASPAR yes 104062003
chr6 107170206 107170216 RAX JASPAR yes 104062004
chr6 107170207 107170215 LBX1 JASPAR yes 104062005
chr6 107170207 107170215 PDX1 JASPAR yes 104062006
chr6 107170207 107170215 VAX1 JASPAR yes 104062007
chr6 107170207 107170215 VAX2 JASPAR yes 104062008
chr6 107170207 107170215 VSX1 JASPAR yes 104062009
chr6 107170207 107170215 VSX2 JASPAR yes 104062010
chr6 107170207 107170221 POU1F1 JASPAR yes 104062011
chr6 107170208 107170220 POU3F1 JASPAR yes 104062012
chr6 107170208 107170220 POU3F2 JASPAR yes 104062013
chr6 107170208 107170221 POU3F3 JASPAR yes 104062014
chr6 107170209 107170221 POU2F1 JASPAR yes 104062015
chr6 107170213 107170226 POU2F2 JASPAR yes 104062016
Genes associated with rs552789038[chr6:107170215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More