EnhancerDB
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  3. rs552798333[chr17:43451899]
Enhancers that have rs552798333[chr17:43451899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs552798333[chr17:43451899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43451478 43452564 TCF7L2 GTRD no Colon (HCT116) 21765586
chr17 43451652 43452042 TCF7L2 GTRD no Colon (HCT116) 21765587
chr17 43451690 43452163 TCF7L2 GTRD no Colon (HCT116) 21765588
chr17 43451797 43452784 TCF7L2 GTRD no Colon (HCT116) 21765589
chr17 43451893 43451903 SREBF1 JASPAR yes 54450214
chr17 43451893 43451903 SREBF2 JASPAR yes 54450215
Genes associated with rs552798333[chr17:43451899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More