EnhancerDB
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  3. rs552826893[chr2:232485768]
Enhancers that have rs552826893[chr2:232485768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 232485741 232486244 vista35163
VISTA
Transcript factors that have rs552826893[chr2:232485768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232485702 232485963 TFAP2C UCSC Txn Factor no Conserved 108435703
chr2 232485758 232485771 SCRT2 JASPAR yes 22229376
chr2 232485758 232485771 SCRT2 JASPAR yes 81727160
chr2 232485758 232485773 SCRT1 JASPAR yes 22229377
chr2 232485758 232485773 SCRT1 JASPAR yes 81727161
Genes associated with rs552826893[chr2:232485768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More