EnhancerDB
  1. Home
  2. SNP
  3. rs552829648[chr1:225642845]
Enhancers that have rs552829648[chr1:225642845]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552829648[chr1:225642845]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225642398 225642862 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21384767
chr1 225642398 225642862 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107874196
chr1 225642416 225642856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384769
chr1 225642416 225642856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874198
chr1 225642446 225642846 FOS UCSC Txn Factor no Conserved 107874202
chr1 225642452 225642848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384774
chr1 225642452 225642848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874204
chr1 225642471 225642855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384776
chr1 225642471 225642855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874206
chr1 225642483 225642853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384777
chr1 225642483 225642853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874207
chr1 225642488 225642892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384779
chr1 225642488 225642892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874209
chr1 225642595 225642875 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21384794
chr1 225642595 225642875 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107874227
chr1 225642616 225642873 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384795
chr1 225642616 225642873 EGR1 UCSC Txn Factor no Conserved 107874228
chr1 225642616 225642873 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874229
Genes associated with rs552829648[chr1:225642845], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More