EnhancerDB
  1. Home
  2. SNP
  3. rs552844000[chr5:171380566]
Enhancers that have rs552844000[chr5:171380566]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs552844000[chr5:171380566]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171380562 171380577 SOX21 JASPAR yes 67749845
chr5 171380562 171380578 SOX4 JASPAR yes 67749846
Genes associated with rs552844000[chr5:171380566], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More