EnhancerDB
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  3. rs552868549[chr12:46867787]
Enhancers that have rs552868549[chr12:46867787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552868549[chr12:46867787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46867258 46867918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541847
chr12 46867258 46867918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027348
chr12 46867292 46867862 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21541848
chr12 46867292 46867862 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108027349
chr12 46867322 46867946 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027350
chr12 46867322 46867948 TCF12 UCSC Txn Factor no Conserved 108027351
chr12 46867322 46867948 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027352
chr12 46867326 46867846 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027353
chr12 46867327 46867917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541849
chr12 46867327 46867917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027354
chr12 46867335 46867991 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027356
chr12 46867341 46867861 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541851
chr12 46867341 46867861 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027357
chr12 46867350 46867806 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541852
chr12 46867350 46867806 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027358
chr12 46867350 46867820 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21541853
chr12 46867350 46867820 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108027359
chr12 46867361 46867924 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027362
chr12 46867361 46867980 EP300 UCSC Txn Factor no Conserved 108027363
chr12 46867362 46867846 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027364
chr12 46867367 46867843 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027365
chr12 46867372 46867836 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21541855
chr12 46867372 46867836 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108027366
chr12 46867381 46867885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541857
chr12 46867381 46867885 TCF7L2 UCSC Txn Factor no Conserved 108027369
chr12 46867381 46867885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027370
chr12 46867384 46867840 JUND UCSC Txn Factor no Conserved 108027371
chr12 46867384 46867840 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108027372
chr12 46867388 46867872 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027374
chr12 46867392 46867868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541858
chr12 46867392 46867868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027375
chr12 46867396 46867960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541861
chr12 46867396 46867960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027378
chr12 46867410 46867794 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541865
chr12 46867410 46867794 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027383
chr12 46867413 46867849 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027386
chr12 46867413 46867889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541867
chr12 46867413 46867889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027387
chr12 46867415 46867871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541868
chr12 46867415 46867871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027388
chr12 46867417 46867953 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027389
chr12 46867424 46867820 REST UCSC Txn Factor no Conserved 108027395
chr12 46867432 46867796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108027398
chr12 46867442 46867838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541877
chr12 46867442 46867838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027404
chr12 46867445 46867829 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027406
chr12 46867453 46867809 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21541879
chr12 46867453 46867809 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108027409
chr12 46867455 46867825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541881
chr12 46867455 46867825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027411
chr12 46867456 46867812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541882
chr12 46867456 46867812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027412
chr12 46867462 46867846 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541885
chr12 46867462 46867846 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027415
chr12 46867465 46868015 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541887
chr12 46867465 46868015 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027417
chr12 46867468 46867787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541888
chr12 46867468 46867787 FOXA2 UCSC Txn Factor no Conserved 108027419
chr12 46867468 46867787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027420
chr12 46867470 46867814 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541890
chr12 46867470 46867814 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027422
chr12 46867472 46867832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541892
chr12 46867472 46867832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027424
chr12 46867479 46867809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541895
chr12 46867479 46867809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027428
chr12 46867481 46867821 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541897
chr12 46867481 46867821 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027430
chr12 46867481 46868072 TFAP2A UCSC Txn Factor no Conserved 108027431
chr12 46867483 46867803 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541899
chr12 46867483 46867803 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027435
chr12 46867486 46867816 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541900
chr12 46867486 46867816 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027436
chr12 46867500 46867796 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21541904
chr12 46867500 46867796 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108027443
chr12 46867542 46868072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541910
chr12 46867542 46868072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027455
chr12 46867550 46868006 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21541911
chr12 46867550 46868006 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027456
chr12 46867557 46867787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541912
chr12 46867557 46867787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027457
chr12 46867565 46868001 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027458
chr12 46867626 46868036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541914
chr12 46867626 46868036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027460
chr12 46867629 46868029 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541915
chr12 46867629 46868029 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027461
chr12 46867783 46867795 YY1 JASPAR yes 120626133
Genes associated with rs552868549[chr12:46867787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More