EnhancerDB
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  3. rs552888452[chr5:90471266]
Enhancers that have rs552888452[chr5:90471266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90450185 90481862 enh22423
Prostate (PC-3) Brain (SK-N-MC) Esophagus Liver Lung (A549) Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs552888452[chr5:90471266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90471254 90471269 FOXA1 JASPAR yes 64173141
chr5 90471256 90471268 FOXC2 JASPAR yes 64173142
chr5 90471256 90471269 POU2F2 JASPAR yes 64173143
chr5 90471256 90471270 POU1F1 JASPAR yes 64173144
chr5 90471257 90471268 FOXB1 JASPAR yes 64173145
chr5 90471257 90471268 FOXC1 JASPAR yes 64173146
chr5 90471257 90471269 POU3F1 JASPAR yes 64173147
chr5 90471257 90471269 POU3F2 JASPAR yes 64173148
chr5 90471257 90471270 POU3F3 JASPAR yes 64173149
chr5 90471258 90471269 FOXA1 JASPAR yes 64173151
chr5 90471258 90471270 POU2F1 JASPAR yes 64173152
chr5 90471259 90471268 POU3F4 JASPAR yes 64173153
chr5 90471259 90471268 POU5F1B JASPAR yes 64173154
chr5 90471260 90471268 FOXL1 JASPAR yes 64173155
chr5 90471264 90471275 FOXB1 JASPAR yes 64173156
chr5 90471264 90471275 FOXC1 JASPAR yes 64173157
chr5 90471264 90471276 MEF2A JASPAR yes 64173158
chr5 90471265 90471277 FOXI1 JASPAR yes 64173159
chr5 90471266 90471270 TEAD2 TRANSFAC yes 64173160
chr5 90471266 90471271 TBP TRANSFAC yes 64173161
chr5 90471266 90471272 TMF TRANSFAC yes 64173162
Genes associated with rs552888452[chr5:90471266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More