EnhancerDB
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  3. rs552903872[chr1:178900163]
Enhancers that have rs552903872[chr1:178900163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs552903872[chr1:178900163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178900157 178900178 IRF1 JASPAR yes 33453914
chr1 178900158 178900179 IRF1 JASPAR yes 33453915
chr1 178900159 178900180 IRF1 JASPAR yes 33453916
chr1 178900160 178900175 FOXP1 JASPAR yes 33453917
chr1 178900160 178900181 IRF1 JASPAR yes 33453918
chr1 178900162 178900177 FOXP1 JASPAR yes 33453919
chr1 178900163 178900178 FOXP1 JASPAR yes 33453920
Genes associated with rs552903872[chr1:178900163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More