EnhancerDB
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  3. rs552920401[chr1:231523003]
Enhancers that have rs552920401[chr1:231523003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552920401[chr1:231523003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231522983 231523003 RREB1 JASPAR yes 36087699
chr1 231522985 231523005 RREB1 JASPAR yes 36087700
chr1 231522987 231523007 RREB1 JASPAR yes 36087701
chr1 231522991 231523011 RREB1 JASPAR yes 36087702
Genes associated with rs552920401[chr1:231523003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More