EnhancerDB
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  3. rs552939533[chr2:26278634]
Enhancers that have rs552939533[chr2:26278634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552939533[chr2:26278634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26278632 26278638 ZNF354C JASPAR yes 72519592
chr2 26278633 26278643 ID4 JASPAR yes 72519593
chr2 26278634 26278643 SNAI2 JASPAR yes 72519594
Genes associated with rs552939533[chr2:26278634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More