EnhancerDB
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  3. rs552946080[chr2:28886202]
Enhancers that have rs552946080[chr2:28886202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552946080[chr2:28886202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28886196 28886204 FOXL1 JASPAR yes 72666217
chr2 28886200 28886204 TEAD2 TRANSFAC yes 72666218
chr2 28886202 28886205 MYB TRANSFAC yes 72666219
Genes associated with rs552946080[chr2:28886202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More