EnhancerDB
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  3. rs552958619[chr12:125386434]
Enhancers that have rs552958619[chr12:125386434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552958619[chr12:125386434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125386429 125386444 MEF2C JASPAR yes 124431440
chr12 125386432 125386447 FOXP1 JASPAR yes 124431441
chr12 125386433 125386448 FOXP1 JASPAR yes 124431442
chr12 125386433 125386454 IRF1 JASPAR yes 124431443
chr12 125386434 125386449 FOXP1 JASPAR yes 124431444
chr12 125386434 125386455 IRF1 JASPAR yes 124431445
Genes associated with rs552958619[chr12:125386434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More