EnhancerDB
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  3. rs552964449[chr17:57916543]
Enhancers that have rs552964449[chr17:57916543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57914612 57916949 vista707
VISTA
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552964449[chr17:57916543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57914681 57919281 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107688747
chr17 57914738 57919309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776391
chr17 57914738 57919309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688752
chr17 57914924 57919014 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107688776
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57915650 57919139 ZNF143 GTRD no Epithelial (MCF-7) 21776406
chr17 57915650 57919139 ZNF143 GTRD no Epithelial (MCF-7) 107688962
chr17 57915969 57918983 ZBTB33 GTRD no Lung (A549) 107688969
chr17 57916007 57916653 TCF7L2 GTRD no Colon (HCT116) 107688971
chr17 57916014 57916676 TCF7L2 GTRD no Colon (HCT116) 107688973
chr17 57916020 57917223 TCF7L2 GTRD no Colon (HCT116) 107688974
chr17 57916032 57916815 ZNF143 GTRD no Epithelial (MCF-7) 21776410
chr17 57916032 57916815 ZNF143 GTRD no Epithelial (MCF-7) 107688975
chr17 57916035 57916824 ZNF143 GTRD no Epithelial (MCF-7) 21776411
chr17 57916035 57916824 ZNF143 GTRD no Epithelial (MCF-7) 107688976
chr17 57916041 57918567 ZNF143 GTRD no Epithelial (MCF-7) 21776412
chr17 57916041 57918567 ZNF143 GTRD no Epithelial (MCF-7) 107688977
chr17 57916056 57916757 TCF7L2 GTRD no Colon (HCT116) 107688979
chr17 57916063 57919213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776413
chr17 57916063 57919213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107688980
chr17 57916069 57918863 ZNF143 GTRD no Epithelial (MCF-7) 21776414
chr17 57916069 57918863 ZNF143 GTRD no Epithelial (MCF-7) 107688981
chr17 57916088 57916833 ZNF143 GTRD no Epithelial (MCF-7) 21776415
chr17 57916088 57916833 ZNF143 GTRD no Epithelial (MCF-7) 107688982
chr17 57916096 57916630 ZNF274 GTRD no Bone Marrow (K562) 107688983
chr17 57916123 57918966 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107688984
chr17 57916165 57916572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107688985
chr17 57916177 57916713 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107688986
chr17 57916204 57918989 ZBTB33 GTRD no Lung (A549) 107688987
chr17 57916218 57916654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776416
chr17 57916218 57916654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107688988
chr17 57916260 57916580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776417
chr17 57916260 57916580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107688990
chr17 57916278 57916768 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107688991
chr17 57916309 57916709 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107688992
chr17 57916312 57916622 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107688993
chr17 57916327 57916727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776418
chr17 57916327 57916727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107688994
chr17 57916360 57916624 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107688995
chr17 57916365 57916675 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107688996
chr17 57916382 57916902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107688997
chr17 57916400 57916778 ZNF274 GTRD no Bone Marrow (K562) 107688998
chr17 57916403 57916859 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776419
chr17 57916403 57916859 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688999
chr17 57916413 57916869 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107689000
chr17 57916431 57918811 ZBTB33 GTRD no Lung (A549) 107689001
chr17 57916433 57916889 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776420
chr17 57916433 57916889 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107689002
chr17 57916451 57916751 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776421
chr17 57916451 57916751 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107689003
chr17 57916479 57916828 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107689004
chr17 57916482 57917009 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107689005
chr17 57916494 57916810 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776422
chr17 57916494 57916810 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107689006
chr17 57916501 57916857 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776423
chr17 57916501 57916857 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107689007
chr17 57916530 57916823 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107689008
chr17 57916541 57916983 SOX2 GTRD no Neural Stem Cells (H9) 21776424
chr17 57916541 57916983 SOX2 GTRD no Neural Stem Cells (H9) 107689009
Genes associated with rs552964449[chr17:57916543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More