EnhancerDB
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  3. rs552987660[chr1:21593940]
Enhancers that have rs552987660[chr1:21593940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552987660[chr1:21593940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21593937 21593948 NFKB1 JASPAR yes 27288930
Genes associated with rs552987660[chr1:21593940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 22379120 22419437 + CDC42 ENSG00000070831.11 22379120 785180 Lung 0.1595 297