EnhancerDB
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  3. rs552989909[chr1:8508916]
Enhancers that have rs552989909[chr1:8508916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552989909[chr1:8508916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8508899 8508919 RREB1 JASPAR yes 26555745
chr1 8508900 8508920 RREB1 JASPAR yes 26555747
chr1 8508904 8508916 FOXI1 JASPAR yes 26555748
chr1 8508908 8508920 FOXI1 JASPAR yes 26555749
chr1 8508908 8508928 RREB1 JASPAR yes 26555750
chr1 8508909 8508923 FOXF2 JASPAR yes 26555751
chr1 8508909 8508924 FOXP1 JASPAR yes 26555752
chr1 8508911 8508923 FOXC2 JASPAR yes 26555753
chr1 8508912 8508923 FOXP2 JASPAR yes 26555754
chr1 8508912 8508924 FOXI1 JASPAR yes 26555755
chr1 8508913 8508928 FOXP1 JASPAR yes 26555756
chr1 8508914 8508922 FOXG1 JASPAR yes 26555757
chr1 8508914 8508922 FOXO3 JASPAR yes 26555758
chr1 8508914 8508925 FOXA1 JASPAR yes 26555759
chr1 8508914 8508929 FOXA1 JASPAR yes 26555760
chr1 8508915 8508927 FOXC2 JASPAR yes 26555761
chr1 8508916 8508928 FOXI1 JASPAR yes 26555762
chr1 8508916 8508936 RREB1 JASPAR yes 26555763
Genes associated with rs552989909[chr1:8508916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More