EnhancerDB
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  3. rs552998832[chr5:171388668]
Enhancers that have rs552998832[chr5:171388668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs552998832[chr5:171388668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171388647 171388668 IRF1 JASPAR yes 67750927
chr5 171388648 171388669 IRF1 JASPAR yes 67750928
chr5 171388653 171388668 FOXP1 JASPAR yes 67750929
chr5 171388654 171388669 FOXP1 JASPAR yes 67750930
Genes associated with rs552998832[chr5:171388668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More