EnhancerDB
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  3. rs553004865[chr17:43451118]
Enhancers that have rs553004865[chr17:43451118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs553004865[chr17:43451118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43450808 43451179 TCF7L2 GTRD no Colon (HCT116) 21765583
chr17 43450829 43451175 TCF7L2 GTRD no Colon (HCT116) 21765584
chr17 43450861 43451125 TCF7L2 GTRD no Colon (HCT116) 21765585
chr17 43451111 43451123 CREB1 JASPAR yes 54450130
Genes associated with rs553004865[chr17:43451118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More