EnhancerDB
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  3. rs553009309[chr17:74425873]
Enhancers that have rs553009309[chr17:74425873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74401123 74447132 enh4607
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553009309[chr17:74425873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74425856 74425875 REST JASPAR yes 55999210
chr17 74425860 74425880 TP63 JASPAR yes 55999211
chr17 74425861 74425879 TP53 JASPAR yes 55999212
chr17 74425868 74425888 TP53 JASPAR yes 55999213
chr17 74425870 74425874 LFA1 TRANSFAC yes 55999214
Genes associated with rs553009309[chr17:74425873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More