-
Home
- SNP
- rs553025340[chr1:54804255]
Enhancers that have rs553025340[chr1:54804255]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
54786534 |
54810675 |
enh369 |
|
|
Transcript factors that have rs553025340[chr1:54804255]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
54803384
|
54804961
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804778
|
|
|
chr1
|
54803527
|
54805269
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107804779
|
|
|
chr1
|
54803538
|
54805442
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107804780
|
|
|
chr1
|
54803717
|
54805478
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107804781
|
|
|
chr1
|
54804246
|
54804259
|
POU2F2
|
JASPAR
|
yes
|
|
28975104
|
|
|
chr1
|
54804252
|
54804265
|
TFAP2A
|
JASPAR
|
yes
|
|
28975106
|
|
|
chr1
|
54804252
|
54804265
|
TFAP2B
|
JASPAR
|
yes
|
|
28975107
|
|
|
chr1
|
54804252
|
54804265
|
TFAP2C
|
JASPAR
|
yes
|
|
28975108
|
|
Genes associated with rs553025340[chr1:54804255], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |