EnhancerDB
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  3. rs553053215[chr15:55574962]
Enhancers that have rs553053215[chr15:55574962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55567262 55578776 enh31390
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Breast Uterus Peripheral Blood (MM.1S) Adrenal Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs553053215[chr15:55574962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55574424 55574974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654647
chr15 55574424 55574974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139869
chr15 55574839 55575103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654650
chr15 55574839 55575103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139872
chr15 55574887 55575020 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654651
chr15 55574887 55575020 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139873
chr15 55574950 55574963 SMAD2 JASPAR yes 23499323
chr15 55574951 55574966 PRDM1 JASPAR yes 23499324
chr15 55574957 55574968 ELK4 JASPAR yes 23499325
chr15 55574957 55574968 FLI1 JASPAR yes 23499326
chr15 55574957 55574970 ELF3 JASPAR yes 23499327
chr15 55574958 55574968 ETV6 JASPAR yes 23499328
chr15 55574958 55574969 ELF5 JASPAR yes 23499329
chr15 55574958 55574970 EHF JASPAR yes 23499330
chr15 55574958 55574971 ELF1 JASPAR yes 23499331
chr15 55574958 55574977 CTCF JASPAR yes 23499332
chr15 55574959 55574966 SPI1 JASPAR yes 23499333
chr15 55574959 55574967 EHF JASPAR yes 23499334
Genes associated with rs553053215[chr15:55574962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More