EnhancerDB
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  3. rs553057688[chr1:27459428]
Enhancers that have rs553057688[chr1:27459428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553057688[chr1:27459428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27459414 27459428 XBP1 JASPAR yes 27679932
chr1 27459426 27459434 FOXO3 JASPAR yes 27679934
chr1 27459427 27459448 REST JASPAR yes 27679935
Genes associated with rs553057688[chr1:27459428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More