EnhancerDB
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  3. rs553066222[chr17:38694468]
Enhancers that have rs553066222[chr17:38694468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553066222[chr17:38694468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38693339 38694575 ZNF274 GTRD no Liver (HepG2) 21755148
chr17 38693455 38694794 ZNF274 GTRD no Liver (HepG2) 21755150
chr17 38693475 38694545 ZNF274 GTRD no Liver (HepG2) 21755151
chr17 38693476 38694721 ZNF274 GTRD no Liver (HepG2) 21755152
chr17 38693579 38694500 ZBTB33 GTRD no Brain (SK-N-SH) 21755161
chr17 38693724 38694589 ZNF274 GTRD no Liver (HepG2) 21755168
chr17 38694015 38694480 ZNF274 GTRD no Liver (HepG2) 21755171
chr17 38694454 38694468 CREB3 JASPAR yes 54223474
chr17 38694454 38694468 CREB3L1 JASPAR yes 54223475
chr17 38694455 38694469 XBP1 JASPAR yes 54223476
Genes associated with rs553066222[chr17:38694468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More