EnhancerDB
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  3. rs553073912[chr17:39804287]
Enhancers that have rs553073912[chr17:39804287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs553073912[chr17:39804287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39804282 39804290 SMAD4 TRANSFAC yes 54268097
chr17 39804284 39804289 SP1 TRANSFAC yes 54268098
Genes associated with rs553073912[chr17:39804287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More