EnhancerDB
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  3. rs553088483[chr6:34919755]
Enhancers that have rs553088483[chr6:34919755]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34911225 34934612 enh9072
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Ovary Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Adrenal Spleen Muscle (Myotube) Neural Stem Cells (H9) Pancreas (Panc1) Heart
Transcript factors that have rs553088483[chr6:34919755]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34919750 34919771 IRF1 JASPAR yes 101251241
chr6 34919751 34919756 SP1 TRANSFAC yes 101251242
chr6 34919752 34919762 ETV6 JASPAR yes 101251243
chr6 34919752 34919763 ELK4 JASPAR yes 101251244
chr6 34919754 34919760 ETS1 JASPAR yes 101251245
chr6 34919754 34919768 STAT1 JASPAR yes 101251246
chr6 34919754 34919769 STAT2 JASPAR yes 101251247
chr6 34919755 34919767 IRF1 JASPAR yes 101251248
Genes associated with rs553088483[chr6:34919755], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More