EnhancerDB
  1. Home
  2. SNP
  3. rs553109204[chr5:149179601]
Enhancers that have rs553109204[chr5:149179601]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149167853 149192675 enh8796
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553109204[chr5:149179601]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149179589 149179602 POU2F2 JASPAR yes 66846435
chr5 149179596 149179610 GATA2 JASPAR yes 66846436
chr5 149179597 149179612 MEF2C JASPAR yes 66846437
chr5 149179598 149179613 MEF2A JASPAR yes 66846438
chr5 149179599 149179611 MEF2A JASPAR yes 66846439
chr5 149179599 149179611 MEF2B JASPAR yes 66846440
chr5 149179599 149179611 MEF2D JASPAR yes 66846441
chr5 149179600 149179610 MEF2A JASPAR yes 66846442
Genes associated with rs553109204[chr5:149179601], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More