EnhancerDB
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  3. rs553127415[chr12:53759708]
Enhancers that have rs553127415[chr12:53759708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs553127415[chr12:53759708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53759245 53759718 ZNF143 GTRD no Epithelial (MCF-7) 21549255
chr12 53759494 53759918 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549257
chr12 53759504 53759944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549258
chr12 53759579 53760035 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549259
chr12 53759660 53760050 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549260
chr12 53759701 53759711 SP1 JASPAR yes 120982664
chr12 53759702 53759712 SP1 JASPAR yes 120982665
chr12 53759702 53760102 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549261
chr12 53759703 53759708 SP1 TRANSFAC yes 120982666
chr12 53759704 53759709 SP1 TRANSFAC yes 120982667
chr12 53759704 53759710 SP1 TRANSFAC yes 120982668
Genes associated with rs553127415[chr12:53759708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More