EnhancerDB
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  3. rs553133150[chr5:172176689]
Enhancers that have rs553133150[chr5:172176689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553133150[chr5:172176689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172176677 172176690 SCRT2 JASPAR yes 67822008
chr5 172176683 172176703 RREB1 JASPAR yes 67822009
chr5 172176684 172176704 RREB1 JASPAR yes 67822010
Genes associated with rs553133150[chr5:172176689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More