EnhancerDB
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  3. rs553174628[chr1:9515031]
Enhancers that have rs553174628[chr1:9515031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553174628[chr1:9515031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9515010 9515031 IRF1 JASPAR yes 26653085
chr1 9515020 9515036 SOX8 JASPAR yes 26653087
chr1 9515026 9515036 GSX2 JASPAR yes 26653088
chr1 9515026 9515036 LBX2 JASPAR yes 26653089
chr1 9515026 9515036 MIXL1 JASPAR yes 26653090
chr1 9515026 9515036 MNX1 JASPAR yes 26653091
chr1 9515026 9515036 RAX JASPAR yes 26653092
chr1 9515026 9515041 HNF1A JASPAR yes 26653093
chr1 9515027 9515035 ISX JASPAR yes 26653094
chr1 9515027 9515035 LHX9 JASPAR yes 26653095
chr1 9515027 9515035 LMX1B JASPAR yes 26653096
chr1 9515027 9515035 PRRX1 JASPAR yes 26653097
chr1 9515027 9515035 RAX2 JASPAR yes 26653098
chr1 9515027 9515035 SHOX JASPAR yes 26653099
chr1 9515027 9515035 UNCX JASPAR yes 26653100
chr1 9515027 9515040 HNF1B JASPAR yes 26653101
chr1 9515027 9515041 ONECUT1 JASPAR yes 26653102
chr1 9515027 9515041 ONECUT2 JASPAR yes 26653103
chr1 9515027 9515041 ONECUT3 JASPAR yes 26653104
chr1 9515028 9515038 CUX1 JASPAR yes 26653105
chr1 9515028 9515038 CUX2 JASPAR yes 26653106
chr1 9515028 9515038 PAX3 JASPAR yes 26653107
chr1 9515028 9515038 PAX7 JASPAR yes 26653108
chr1 9515031 9515044 DUXA JASPAR yes 26653109
Genes associated with rs553174628[chr1:9515031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More