EnhancerDB
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  3. rs553196225[chr1:206900075]
Enhancers that have rs553196225[chr1:206900075]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs553196225[chr1:206900075]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206899540 206906636 ZNF274 GTRD no Blood (GM12878) 21372614
chr1 206900064 206900075 TFAP2A JASPAR yes 34822978
chr1 206900064 206900075 TFAP2B JASPAR yes 34822979
chr1 206900064 206900075 TFAP2C JASPAR yes 34822980
Genes associated with rs553196225[chr1:206900075], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More