EnhancerDB
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  3. rs553201305[chr16:85598929]
Enhancers that have rs553201305[chr16:85598929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553201305[chr16:85598929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85598060 85598936 TCF7L2 GTRD no Colon (HCT116) 21729319
chr16 85598062 85599177 ZNF143 GTRD no Epithelial (MCF-7) 21729320
chr16 85598201 85598999 TCF7L2 GTRD no Colon (HCT116) 21729337
chr16 85598415 85598931 ZNF274 GTRD no Bone Marrow (K562) 21729338
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 21729339
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216159
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216160
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216161
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216162
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216163
chr16 85598924 85598936 HINFP JASPAR yes 12077257
chr16 85598929 85598946 ESR1 JASPAR yes 12077258
Genes associated with rs553201305[chr16:85598929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More