EnhancerDB
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  3. rs553201551[chr16:89425058]
Enhancers that have rs553201551[chr16:89425058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553201551[chr16:89425058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 21738343
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225805
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225806
chr16 89421679 89427155 ZNF274 GTRD no Blood (GM12878) 21738344
chr16 89421679 89427155 ZNF274 GTRD no Blood (GM12878) 108225807
chr16 89421679 89427155 ZNF274 GTRD no Blood (GM12878) 108225808
chr16 89424317 89427605 ZNF274 GTRD no Blood (GM12878) 21738373
chr16 89424317 89427605 ZNF274 GTRD no Blood (GM12878) 108225838
chr16 89424365 89426341 ZNF274 GTRD no Blood (GM12878) 21738375
chr16 89424365 89426341 ZNF274 GTRD no Blood (GM12878) 108225840
chr16 89424367 89425251 ZNF274 GTRD no Blood (GM12878) 21738376
chr16 89424367 89425251 ZNF274 GTRD no Blood (GM12878) 108225841
chr16 89424483 89426880 ZNF274 GTRD no Blood (GM12878) 21738381
chr16 89424483 89426880 ZNF274 GTRD no Blood (GM12878) 108225846
chr16 89425050 89425065 FOXA1 JASPAR yes 12335997
chr16 89425052 89425063 FOXP2 JASPAR yes 12335998
chr16 89425052 89425066 FOXF2 JASPAR yes 12335999
chr16 89425053 89425061 FOXD1 JASPAR yes 12336000
chr16 89425053 89425061 FOXO3 JASPAR yes 12336001
chr16 89425054 89425061 FOXD2 JASPAR yes 12336002
chr16 89425054 89425061 FOXI1 JASPAR yes 12336003
chr16 89425054 89425061 FOXL1 JASPAR yes 12336004
chr16 89425054 89425061 FOXO4 JASPAR yes 12336005
chr16 89425054 89425061 FOXO6 JASPAR yes 12336006
chr16 89425054 89425061 FOXP3 JASPAR yes 12336007
chr16 89425054 89425062 FOXO3 JASPAR yes 12336008
chr16 89425054 89425065 FOXA1 JASPAR yes 12336009
chr16 89425058 89425074 ZNF143 JASPAR yes 12336010
Genes associated with rs553201551[chr16:89425058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More