EnhancerDB
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  3. rs553219476[chr3:148961761]
Enhancers that have rs553219476[chr3:148961761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 148959465 148968655 enh7610
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553219476[chr3:148961761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 148961753 148961766 SMAD2 JASPAR yes 6476221
chr3 148961753 148961767 TLX1 JASPAR yes 6476222
chr3 148961754 148961768 TLX1 JASPAR yes 6476223
Genes associated with rs553219476[chr3:148961761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More