EnhancerDB
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  3. rs553228723[chr3:186666367]
Enhancers that have rs553228723[chr3:186666367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 186664911 186668475 vista1210
VISTA
chr3 186665345 186714055 enh7749
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553228723[chr3:186666367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 186666363 186666378 RUNX2 JASPAR yes 8362356
chr3 186666363 186666378 RUNX2 JASPAR yes 21017502
chr3 186666366 186666378 GLI2 JASPAR yes 8362357
chr3 186666366 186666378 GLI2 JASPAR yes 21017503
chr3 186666367 186666379 ZBTB7A JASPAR yes 8362358
chr3 186666367 186666379 ZBTB7A JASPAR yes 21017504
Genes associated with rs553228723[chr3:186666367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More