EnhancerDB
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  3. rs553238552[chr12:52600770]
Enhancers that have rs553238552[chr12:52600770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553238552[chr12:52600770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52600518 52600849 ZNF143 GTRD no Epithelial (MCF-7) 21546662
chr12 52600751 52600771 RREB1 JASPAR yes 120927885
chr12 52600753 52600773 RREB1 JASPAR yes 120927886
chr12 52600758 52600772 PLAG1 JASPAR yes 120927887
chr12 52600769 52600775 ZNF354C JASPAR yes 120927888
Genes associated with rs553238552[chr12:52600770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More