EnhancerDB
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  3. rs553253484[chr16:20886540]
Enhancers that have rs553253484[chr16:20886540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 20881645 20897799 enh3931
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553253484[chr16:20886540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 20886532 20886552 RREB1 JASPAR yes 9911574
chr16 20886534 20886554 RREB1 JASPAR yes 9911575
chr16 20886536 20886556 RREB1 JASPAR yes 9911576
chr16 20886538 20886558 RREB1 JASPAR yes 9911577
chr16 20886540 20886560 RREB1 JASPAR yes 9911578
Genes associated with rs553253484[chr16:20886540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More