EnhancerDB
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  3. rs553255003[chr5:171388653]
Enhancers that have rs553255003[chr5:171388653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs553255003[chr5:171388653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171388642 171388660 NR3C1 JASPAR yes 67750918
chr5 171388645 171388659 ONECUT1 JASPAR yes 67750920
chr5 171388645 171388659 ONECUT2 JASPAR yes 67750921
chr5 171388645 171388659 ONECUT3 JASPAR yes 67750922
chr5 171388646 171388656 PAX3 JASPAR yes 67750923
chr5 171388646 171388656 PAX7 JASPAR yes 67750924
chr5 171388646 171388657 PHOX2A JASPAR yes 67750925
chr5 171388646 171388657 PROP1 JASPAR yes 67750926
chr5 171388647 171388668 IRF1 JASPAR yes 67750927
chr5 171388648 171388669 IRF1 JASPAR yes 67750928
chr5 171388653 171388668 FOXP1 JASPAR yes 67750929
Genes associated with rs553255003[chr5:171388653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More