EnhancerDB
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  3. rs553269258[chr12:125393389]
Enhancers that have rs553269258[chr12:125393389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs553269258[chr12:125393389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125393380 125393400 RREB1 JASPAR yes 124432707
chr12 125393386 125393401 FOXP1 JASPAR yes 124432708
chr12 125393387 125393402 FOXP1 JASPAR yes 124432709
chr12 125393388 125393403 FOXP1 JASPAR yes 124432710
chr12 125393389 125393404 FOXP1 JASPAR yes 124432711
Genes associated with rs553269258[chr12:125393389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More