EnhancerDB
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  3. rs553278956[chr12:58295300]
Enhancers that have rs553278956[chr12:58295300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58279727 58295915 enh2398
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553278956[chr12:58295300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58295279 58295300 IRF1 JASPAR yes 121149158
chr12 58295282 58295303 IRF1 JASPAR yes 121149161
chr12 58295286 58295301 STAT2 JASPAR yes 121149163
chr12 58295290 58295308 NR3C1 JASPAR yes 121149164
Genes associated with rs553278956[chr12:58295300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More