EnhancerDB
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  3. rs553296260[chr5:167741808]
Enhancers that have rs553296260[chr5:167741808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 167720145 167777295 enh22779
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr5 167741798 167742197 vista50022
VISTA
Transcript factors that have rs553296260[chr5:167741808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 167741690 167742261 STAT3 UCSC Txn Factor no Conserved 108537328
chr5 167741735 167742405 EP300 UCSC Txn Factor no Conserved 108537329
chr5 167741781 167742370 TCF12 UCSC Txn Factor no Conserved 108537330
Genes associated with rs553296260[chr5:167741808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More