EnhancerDB
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  3. rs553299484[chr17:57068871]
Enhancers that have rs553299484[chr17:57068871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57067145 57084553 enh4500
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553299484[chr17:57068871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57068205 57070301 ZNF274 GTRD no Bone Marrow (K562) 108275682
chr17 57068858 57068874 POU4F2 JASPAR yes 55037314
chr17 57068858 57068874 POU4F3 JASPAR yes 55037315
chr17 57068860 57068874 FOXF2 JASPAR yes 55037316
chr17 57068860 57068874 ONECUT3 JASPAR yes 55037317
chr17 57068862 57068874 FOXC2 JASPAR yes 55037318
chr17 57068864 57068878 ONECUT3 JASPAR yes 55037319
chr17 57068864 57068879 HNF1A JASPAR yes 55037320
chr17 57068866 57068877 FOXB1 JASPAR yes 55037321
chr17 57068866 57068877 FOXC1 JASPAR yes 55037322
chr17 57068867 57068879 FOXI1 JASPAR yes 55037323
Genes associated with rs553299484[chr17:57068871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More