EnhancerDB
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  3. rs553314725[chr17:1899881]
Enhancers that have rs553314725[chr17:1899881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553314725[chr17:1899881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1899879 1899894 PRDM1 JASPAR yes 52714491
chr17 1899881 1899902 IRF1 JASPAR yes 52714492
Genes associated with rs553314725[chr17:1899881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More