EnhancerDB
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  3. rs553319927[chr1:212106114]
Enhancers that have rs553319927[chr1:212106114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs553319927[chr1:212106114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212105180 212106902 ZNF274 GTRD no Bone Marrow (K562) 21377716
chr1 212105885 212106129 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21377718
chr1 212105959 212106349 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21377719
chr1 212106034 212106250 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21377720
chr1 212106100 212106119 REST JASPAR yes 35093317
chr1 212106108 212106123 AR JASPAR yes 35093318
Genes associated with rs553319927[chr1:212106114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More