EnhancerDB
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  3. rs553334401[chr1:9520697]
Enhancers that have rs553334401[chr1:9520697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553334401[chr1:9520697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9520690 9520699 HIC2 JASPAR yes 26653975
chr1 9520691 9520707 ZNF143 JASPAR yes 26653976
chr1 9520692 9520702 SP1 JASPAR yes 26653977
chr1 9520693 9520697 LFA1 TRANSFAC yes 26653978
chr1 9520693 9520713 TP63 JASPAR yes 26653979
Genes associated with rs553334401[chr1:9520697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More