EnhancerDB
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  3. rs553347926[chr14:50534028]
Enhancers that have rs553347926[chr14:50534028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50522965 50540151 enh3176
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553347926[chr14:50534028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50531376 50534613 ZNF143 GTRD no Epithelial (MCF-7) 21616613
chr14 50531376 50534613 ZNF143 GTRD no Epithelial (MCF-7) 108100904
chr14 50531497 50534509 ZNF143 GTRD no Epithelial (MCF-7) 21616619
chr14 50531497 50534509 ZNF143 GTRD no Epithelial (MCF-7) 108100911
chr14 50532082 50534083 ZNF274 GTRD no Blood (GM12878) 21616755
chr14 50532082 50534083 ZNF274 GTRD no Blood (GM12878) 108101071
chr14 50532692 50534844 TCF7L2 GTRD no Colon (HCT116) 21616852
chr14 50533667 50534340 ZBTB33 GTRD no Brain (SK-N-SH) 21616865
chr14 50533808 50534312 ZBTB33 GTRD no Brain (SK-N-SH) 21616866
chr14 50533851 50534517 ZNF143 GTRD no Epithelial (MCF-7) 21616867
chr14 50533863 50534381 ZNF143 GTRD no Epithelial (MCF-7) 21616868
chr14 50533889 50534487 ZNF143 GTRD no Epithelial (MCF-7) 21616869
chr14 50533975 50534393 ZNF143 GTRD no Epithelial (MCF-7) 21616870
chr14 50534011 50534032 IRF1 JASPAR yes 115227291
chr14 50534013 50534028 STAT2 JASPAR yes 115227292
chr14 50534014 50534028 STAT1 JASPAR yes 115227293
chr14 50534015 50534030 IRF9 JASPAR yes 115227294
Genes associated with rs553347926[chr14:50534028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More