EnhancerDB
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  3. rs553369563[chr1:203496083]
Enhancers that have rs553369563[chr1:203496083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553369563[chr1:203496083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203495641 203496117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369222
chr1 203495709 203496292 ZNF143 GTRD no Epithelial (MCF-7) 21369223
chr1 203495724 203496413 ZNF143 GTRD no Epithelial (MCF-7) 21369224
chr1 203495786 203496241 ZBTB33 GTRD no Brain (SK-N-SH) 21369227
chr1 203495811 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369228
chr1 203495825 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369229
chr1 203495879 203496245 ZNF274 GTRD no Cervix (HeLa-S3) 21369230
chr1 203496063 203496083 RREB1 JASPAR yes 34635742
chr1 203496065 203496085 RREB1 JASPAR yes 34635743
chr1 203496067 203496087 RREB1 JASPAR yes 34635744
chr1 203496069 203496089 RREB1 JASPAR yes 34635745
chr1 203496073 203496093 RREB1 JASPAR yes 34635746
Genes associated with rs553369563[chr1:203496083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More