EnhancerDB
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  3. rs553380094[chr19:10868638]
Enhancers that have rs553380094[chr19:10868638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553380094[chr19:10868638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10868618 10868639 IRF1 JASPAR yes 112436524
chr19 10868619 10868640 IRF1 JASPAR yes 112436526
chr19 10868620 10868641 IRF1 JASPAR yes 112436528
chr19 10868621 10868642 IRF1 JASPAR yes 112436530
chr19 10868622 10868643 IRF1 JASPAR yes 112436532
chr19 10868623 10868638 FOXP1 JASPAR yes 112436533
chr19 10868623 10868644 IRF1 JASPAR yes 112436534
chr19 10868624 10868639 FOXP1 JASPAR yes 112436535
chr19 10868624 10868645 IRF1 JASPAR yes 112436536
chr19 10868625 10868640 FOXP1 JASPAR yes 112436537
chr19 10868625 10868646 IRF1 JASPAR yes 112436538
chr19 10868626 10868641 FOXP1 JASPAR yes 112436539
chr19 10868626 10868647 IRF1 JASPAR yes 112436540
chr19 10868627 10868642 FOXP1 JASPAR yes 112436541
chr19 10868629 10868644 FOXP1 JASPAR yes 112436542
chr19 10868630 10868651 IRF1 JASPAR yes 112436543
chr19 10868631 10868646 FOXP1 JASPAR yes 112436544
chr19 10868631 10868652 IRF1 JASPAR yes 112436545
chr19 10868632 10868653 IRF1 JASPAR yes 112436546
chr19 10868636 10868651 PRDM1 JASPAR yes 112436547
chr19 10868636 10868657 IRF1 JASPAR yes 112436548
chr19 10868637 10868652 FOXP1 JASPAR yes 112436549
chr19 10868638 10868653 IRF9 JASPAR yes 112436550
Genes associated with rs553380094[chr19:10868638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More